Biomedical Informatics meetings & conferences

ACM Sixth International Workshop on Data and Text Mining in Biomedical Informatics (DTMBIO)

October 29, 2012

In conjunction with ACM 20th Conference on Information and Knowledge Management (CIKM) Maui, Hawaii, USA

October 29-November 2, 2012

DTMBIO 12 organizers are pleased to announce that the sixth DTMBIO will be held in conjunction with CIKM, one of the largest data and text mining conferences. While CIKM presents the state-of-the-art research in informatics with the primary focus on data and text mining, the main focus of DTMBIO is on biomedical and healthcare informatics. DTMBIO delegates will bring forth interesting applications of up-to-date informatics in the context of biomedical research.

Biological researchers face the current challenge of making effective use of the enormous amount of electronic biomedical data in order to better understand and explain complex biological systems. The biomedical data repositories include data in a wide variety of forms, including bibliographic information from electronic medical journals, gene expression data from Microarray experiments, protein identification and quantification data from proteomics experiments, genomic sequences gathered by the Human Genome Project, and patient healthcare records. The ability to automatically and effectively extract, integrate, understand and make use of information embedded in such heterogeneous - structured and unstructured - data remains a challenging task.

Topic of Interest
The relevant topics include the following (but not limited to):

- Proposal and assessment of novel Text Mining (TM) evaluation
- Evaluation methods of biomedical applications, shared tasks
- Biomedical and Clinical text mining applications
- Information extraction from biomedical and clinical corpora (full texts, abstracts, EHRs, clinical trials, etc)
- Information retrieval from large biomedical data collections
- Gene sequence annotation
- Protein/RNA structure prediction
- Medical Ontologies and Text Mining
- Sequence and structural motifs
- Modeling of biochemical pathways and biological networks
- Image Mining in Medical and healthcare informatics
- Data and Text Mining solutions in biomedical informatics, for applications such as drug development, system biology, biomedical working processes
- Information integration for Data and Text Mining
- Mining multi-relational data

Genome Informatics Workshop 2012

December 12-14, 2012 Tainan, Taiwan

Genome Informatics Workshop (GIW) is the longest running international bioinformatics conference in the world. The scope includes all works that are ultimately devoted to the computational understanding of biological systems on the molecular basis and the aims are to present recent results of both theoretical and practical research, to demonstrate biological systems, and to show new applications and directions of future research. The first GIW was held at Tokyo in 1990. Since then, GIW has been held annually around the countries in Asia-Pacific region. This year's GIW is the 23rd anniversary and will be held at Tainan in Taiwan. The purpose of GIW2012 is to provide an international forum for scientists and researchers to exchange ideas and approaches.

National Cheng Kung University and Taiwan Society for Bioinformatics and Systems Biology (TSBSB) are honored to host the GIW2012. We are delighted to give you a warm welcome to Tainan in Taiwan.

Managing Interoperability & compleXity in Health Systems

held in conjunction with the 21st ACM International Conference on Information and Knowledge Management, CIKM’12

October 29 to November 2, 2012, Maui, Hawaii, USA

Topics of interest, include but are not limited to:

-- Bio-medical Data-Mining, Information retrieval and extraction and NLP on biomedical text

-- Inference and statistical Models of diseases & Multimorbidity

-- Clinical Information Retrieval, Management and Normalization

-- Medical Knowledge Representation and Reasoning, Expert and Clinical Decision Support Systems -- Interoperability in Distributed healthcare Systems

-- Clinical Information and Interoperability Standards (e.g. HL7) Clinical Terminologies, Classifications (e.g. ICD 10) and
biomedical ontologies (e.g. SNOMED - CT)

-- Hospital Enterprise Information Management Systems, Electronic Health Record, (EHR), Clinical Document Architecture

2012 Quetelet Seminar--Adult Mortality and Morbidity

December 5-7, 2012 Research Centre in Population and Societies, Catholic University of Louvain, Louvain-la-Neuve, Belgium

Numerous demographic studies have been focusing on mortality and range from analysis of age-specific mortality to cause-of-death analysis or risks factors analysis. In countries with a long statistical tradition, mortality levels by sex, age and cause of death are easily obtained. Epidemiologists as well as demographers took interest in identifying risks factors and markers by age, sex and cause. Although these factors and markers remain the same for morbidities and the resulting mortality, little is known about morbidity levels, be it in terms of prevalence or incidence, except for pathologies that are recorded in specific registrars or for which large surveys are conducted. In countries with incomplete demographic data, both mortality and morbidity are little or badly documented except when subjected to specific surveys such as under-5 mortality or, to a lesser extent, morbidity. The need for medical diagnosis and assessment of severity of illness makes morbidity data collection especially challenging. Morbidity data collection is especially challenging as it involves. In addition, in armed conflict, post-conflict or natural disaster situations, evaluating the number of victims is crucial to assess needs as well as to ease the reconciliation process.

The 2012 Quetelet Seminar will focus on adult age morbidity and mortality analysis from the data collection and measurement perspective. It will be organised in collaboration with the Centre for Research on the Epidemiology of Disasters (UCL-CRED/WHO) and International Network for the Demographic Evaluation of Populations and Their Health in Developing Countries (INDEPTH). Communications will cover existing or in-the-making tools for data collection and measurement that serve to estimate adult-age morbidity levels in countries with good-level statistical data and adult-age morbidity and mortality levels in countries with incomplete data. Particular attention will be devoted to papers that deal with estimating mortality and morbidity in crisis or post-crisis time.

The 2012 Quetelet Seminar will be organised along the following three axes:

1. Morbidity Analysis

What are the existing data collection and measurement tools to estimate incidence and prevalence of diseases, including chronic diseases? What are their limits?

What morbidity data collection and registration tools are most effective? What are the most reliable data to collect for the measurement of functional and cognitive abilities in a population so as to evaluate dependency ratios? What health monitoring systems should be developed to detect and prevent infectious disease?

2. Adult mortality in countries where data are incomplete

What are the latest developments in the estimation of adult mortality in countries where civil registration data are incomplete or non-existent? How has adult mortality changed recently in developing countries, more than three decades after the onset of the HIV epidemic and in a context of increased access to antiretroviral treatment? Beyond mortality levels, how are inequalities in adult mortality analysed (by sex, according to educational or poverty levels)? What are the lessons to be learned from demographic surveillance sites, particularly in terms of causes of death, as reflected by verbal autopsies and associated tools?

3. Demographic impacts of armed conflicts and natural disasters

What impact armed conflicts and natural disasters have on adult morbidity and mortality? How is this impact measured? What different forms of resilience develop and how are they captured? What early warning systems can be put in place to limit the impact of disasters?

International Society for Disease Surveillance Annual Conference

The ISDS Annual Conference is the premier event dedicated to the advancement of the science and practice of biosurveillance. This year’s theme, Expanding Collaborations to Chart a New Course in Public Health Surveillance, will highlight the importance of working together across agencies, sectors, and disciplines to improve surveillance methods and population health outcomes. The conference will be held at the Sheraton San Diego Hotel and Marina in San Diego, CA, December 4-5, 2012, with Pre-Conference Workshops on December 3rd.

The ISDS Conference draws professionals from a broad range of disciplines— epidemiology and computer science to mathematical modeling and health policy—to learn and contribute the latest achievements, methodologies, best practices, conceptual frameworks, and technical innovations in the rapidly evolving field of biosurveillance. This year's conference will provide fertile ground for cultivating new ideas and partnerships with roundtable discussions, panels and other opportunities to collaborate.

The scope of this conference includes all of the components, policies, methods, practices, infrastructure, research and evaluation related to timely surveillance of communicable diseases, chronic diseases and injuries. This includes notifiable conditions, adverse events and emerging/novel threats; biological, chemical, and radiological health threats; plant, animal, and food surveillance; and environmental monitoring.

International Federation for Information Processing/International Medical Informatics Association International Working Conference on Interfacing Bio- and Medical Informatics

27 September 2012 Amsterdam, the Netherlands

From 24 to 26 September 2012 the International Federation for Information Processing (IFIP) is having its World Computer Congress WCC2012 in Amsterdam, the Netherlands (www.wcc-2012.org). During the WCC2010 conference in Brisbane, Australia, IFIP and the International Medical Informatics Association (IMIA) organized a joint conference for the first time in their history. Also this time a joint one-day associated meeting will be held on Thursday 27 September. The topic of this meeting will be the link between bioinformatics and medical informatics. IFIP’s Working Groups 5.13 Bioinformatics and its applications and IMIA’s Working Group on Informatics in Genomic Medicine (IGM) are working in this area and supporting this event.

Contact
Prof.dr. Arie Hasman e-mail: a.hasman@amc.uva.nl

Conference topics

Applications:

Personalized medicine

Cancer informatics

Population genetics

Bioinformatics approaches for diseases study

Genomics and proteomics in medicine

Analysis of gene expression, mutation, variations and next generation sequencing

Linking genotype with phenotype

Tools:

Databases, data management and integration

Query languages, information retrieval, interoperability, biomedical ontologies and semantics

Knowledge discovery, machine learning, pattern recognition and text mining

Data visualization

High-performance, grid and cloud computing

International Telecommunication Union Kaleidoscope 2013 Building Sustainable Communities Academic Conference

22–24 April 2013, Kyoto, Japan

Kaleidoscope 2013 Building Sustainable Communities is the fifth in a series of peer-reviewed academic conferences organized
by ITU that brings together a wide range of views from universities, industry and research institutions of different fields. The aim of Kaleidoscope conferences is to identify emerging developments in Information and Communication Technologies (ICTs) at an early stage to generate successful products and services through the development of international and open standards.

Future technologies should be designed to enhance the quality of human life. Kaleidoscope 2013 will, therefore, highlight multidisciplinary aspects of future ICTs including future services and applications demand as well as socio-economic, cultural, ethical, legal, and sustainable development policy aspects of communities of the future.

ICTs can be used as a catalyst for transforming life to meet the challenges of the new millennium, including global economic and
financial crises, high unemployment rates, accessibility issues, global diseases, food availability and distribution, climate change,
environmental disasters, energy consumption, transport systems, safety, security, and welfare.

Sustainable communities will combine human-oriented technologies and human values.

Besides technical issues, building sustainable communities also raises ethical concerns such as responsibility for future generations and for the environment, as well as for data and information privacy. Therefore, an improved understanding of technology, its suitable application, and a high consideration of its potential consequences are necessary.

To address these issues, and for a co-evolution of technology and sustainable communities, standards are indispensable. Developing these standards will require concerted global efforts by inter-sectoral stakeholders. This conference will help to further such collaborations.

Track 1: Technology and architecture evolution

-- Long-distance and ultra-high-speed transmission network systems (terabit, exabit)
-- Disaster relief systems, network resilience and recovery
-- Wireless sensor networks
-- Optical wireless communication
-- Human-centric, cognitive and context-aware systems
-- Machine-to-machine communication and Internet of Things
-- Body-area networks
-- Near-field communications
-- Environmental and biometric actuators and sensors
-- Security and privacy-enhancing technologies
-- Pervasive and trusted network and service infrastructure
-- Mobility and nomadicity
-- Adaptive antenna techniques

Track 2: ICT applications and services for sustainable communities

-- e-government and e-democracy
-- e-learning and e-science
-- e-agriculture
-- e-health and telemedicine
-- Ageing and ambient assistive living
-- Smart cities: utilities, transport, buildings and homes
-- Innovative applications and content delivery (IPTV, games, etc.)
-- Mobile payment and money transfer
-- Augmented reality and technology intelligence
-- Location-based services
-- Service layer requirements
-- XaaS (Anything as a Service)
-- QoS for differentiated source
-- Location services

Track 3: Social, economic and policy aspects of ICT in sustainable communities

-- Digital rights and identity management
-- Societal impact
-- Legislative and regulatory frameworks
-- Security, confidentiality and privacy
-- Accessibility and usability
-- Business models (including accounting, billing and charging)
-- Standardization models
-- Network neutrality
-- Inclusiveness, affordability and equal access
-- Internationalization and localization
-- Environmental sustainability
-- Ethical issues
-- Regulation (for QoS, network sharing, etc.)
-- Standardization and innovation management
-- Stakeholder perceptions in standards
-- Standards in healthcare services

Contact: kaleidoscope@itu.int

2nd International Conference on Global Telehealth - GT2012

“Delivering Quality Healthcare Anywhere Through Telehealth”

25 - 28, 2012 November Sydney, Australia

Following on from the success of Global Telehealth 2010, the Australasian Telehealth Society is pleased to announce Global Telehealth 2012, an international scientific meeting covering the full breadth of Telehealth with tutorial sessions, peer reviewed paper presentations on current topics of interest, and a range of invited international experts as keynote speakers.

The 2nd International Conference on Global Telehealth will held 26-28 November 2012 in Sydney, Australia.

More Information: http://www.aths.org.au/GT2012/

Third International Conference on Global Trends in Biomedical Informatics, Research Education and Globalization

Organized by the Department of Health Informatics, School of Health Related Professions, University of Medicine and Dentistry of New Jersey (UMDNJ)

It is our great pleasure to invite you to participate in the Third International Conference on Global Trends in Biomedical Informatics, Research Education and Globalization which will take place on November 15th, 2012 in Newark, NJ, USA.

This conference will provide a unique opportunity for disseminating the latest advances, applications and future trends in the area of Biomedical Informatics. The conference will meet the diverse interests of the delegates - from conceptual, theoretical, practical applications to commercialization. It will be the center of action for health informatics professionals to interact with their peers, meet leaders in the field, learn about new products, and see demonstrations from top healthcare systems and services vendors.

CONTACT DETAILS
Dr. Syed Haque
Chair & Program Director

Ms. Yvonne Rolley
Conference Coordinator
Department of Health Informatics
UMDNJ-School of Health Related Professions
65 Bergen Street, Rm.350
Newark, NJ 07107-3001
Phone: 973 972 6871, Fax: 973 972 8540

Fifth International Symposium on Semantic Mining in Biomedicine (SMBM 2012)

September 3rd and 4th, 2012 Institute of Computational Linguistics, University of Zurich, Switzerland

The 5th International Symposium on Semantic Mining in Biomedicine (SMBM) 3rd-4th September, 2012 will be held at the Institute of Computational Linguistics, University of Zurich, Switzerland. Support is provided by the projects SASEBio/OntoGene (SNF105315_130558/1) and MANTRA (EU FP7).

SMBM 2012 aims to bring together researchers from text and data mining in biomedicine, medical, bio- and chemoinformatics, and researchers from biomedical ontology design and engineering.

SMBM 2012 is the follow-up event of SMBM 2010 (EBI, U.K.), SMBM 2008 (University of Turku, Finland), SMBM 2006 (University of Jena, Germany), and SMBM 2005 (EBI, U.K.).

Selected papers will be considered for publication in a special issue of the Journal of Biomedical Semantics (JBMS).

[contact the organization committee via smbmzurich @ gmail.com]